🧬 Not sure where to start? Try searching for your diagnosis above or visit the “Diseases” section.

Autoimmune Polyendocrine Syndrome Type 3 (APS3)

Also Known As: APS type 3, APS3, Autoimmune polyglandular syndrome type 3, Autoimmune endocrinopathy type 3
System: Immune System and Endocrine System
Autoantibodies:
  • Anti-TPO (thyroid peroxidase) antibodies

  • Anti-thyroglobulin antibodies

  • Anti-GAD antibodies (if diabetes is present)

  • Anti-intrinsic factor antibodies (for B12-related issues)

  • Anti-tTG antibodies (in celiac disease)

Primary Organ or Body Part Affected:
  • Thyroid gland (always)

  • May also include: pancreas, stomach, intestines, skin

Acceptance as Autoimmune: Confirmed
Autoimmune Polyendocrine Syndrome Type 3 (APS3)

What is Autoimmune Polyendocrine Syndrome Type 3 (APS3)?

Autoimmune Polyendocrine Syndrome Type 3 (APS3) is an autoimmune condition where the immune system attacks multiple hormone-producing glands, most notably the thyroid. It always includes autoimmune thyroid disease, such as Hashimoto’s thyroiditis or Graves’ disease, and at least one other autoimmune disease—but never involves the adrenal glands (unlike APS1 and APS2).

What are the signs and symptoms of Autoimmune Polyendocrine Syndrome Type 3 (APS3)?

Because APS3 involves multiple autoimmune diseases, symptoms vary widely based on which glands or systems are affected. Common features may include:

  • Fatigue

  • Weight changes

  • Cold or heat intolerance

  • Constipation or diarrhea

  • Mood swings or anxiety

  • Hair thinning or loss

  • Irregular menstrual cycles

Specific conditions seen in APS3 include:

  • Hashimoto’s thyroiditis – hypothyroidism (tiredness, weight gain, feeling cold)

  • Graves’ disease – hyperthyroidism (weight loss, fast heartbeat, anxiety)

  • Type 1 diabetes (LADA) – increased thirst, frequent urination, weight loss

  • Celiac disease – bloating, diarrhea, nutrient deficiencies

  • Pernicious anemia – fatigue, brain fog, numbness

What are the causes of Autoimmune Polyendocrine Syndrome Type 3 (APS3)?

1. Genetic Predisposition

APS3 tends to run in families with a history of autoimmune diseases, especially thyroid problems or type 1 diabetes. Some of the key genes and markers involved include:

  • HLA genes – especially HLA-DR3, DR4, and DQ2/DQ8, which are also linked to type 1 diabetes and celiac disease.

  • CTLA4 – a gene involved in regulating immune responses.

  • PTPN22 – another gene that affects immune cell signaling.

These genes make your immune system more likely to mistakenly attack healthy tissues, especially endocrine (hormone-producing) organs.


🦠 2. Immune System Dysregulation

APS3 involves loss of immune tolerance, meaning the immune system stops recognizing certain organs (like the thyroid or pancreas) as “self.” This triggers:

  • Autoantibodies that target specific tissues

  • T-cell–mediated destruction of hormone-producing cells

This immune breakdown affects more than one organ, creating the “polyendocrine” aspect of the syndrome.


🌍 3. Environmental Triggers

In people with a genetic predisposition, certain environmental factors may “switch on” the autoimmune process:

  • Viral infections – like Epstein-Barr virus or enteroviruses

  • Stress – including emotional or physical trauma

  • Gut dysbiosis – imbalanced gut bacteria may affect immune tolerance

  • Vitamin D deficiency – linked to many autoimmune diseases

  • Gluten exposure – in those predisposed to celiac disease

These triggers don’t cause APS3 on their own but may act as catalysts in genetically susceptible individuals.

Diagnosis

Diagnosis is clinical and based on the presence of autoimmune thyroid disease and at least one other autoimmune disorder—but no adrenal insufficiency.

Tests may include:

  • Thyroid antibody panels (anti-TPO, anti-thyroglobulin)

  • Blood sugar and HbA1c (if diabetes is suspected)

  • Vitamin B12 levels and anti-intrinsic factor antibodies

  • Tissue transglutaminase antibodies (for celiac disease)

A family history of autoimmunity can be a clue.

Treatment

There is no cure for APS3, but each component disease is treated individually:

  • Thyroid hormone replacement (levothyroxine for Hashimoto’s)

  • Anti-thyroid drugs or radioactive iodine (for Graves’)

  • Insulin (if diabetes is present)

  • Gluten-free diet (for celiac disease)

  • Vitamin B12 injections (for pernicious anemia)

Patients need lifelong follow-up and management of each affected gland or organ.

Prognosis

Prognosis is generally good with proper treatment. However, patients may develop additional autoimmune conditions over time, so regular monitoring is essential.

Prevalence

Exact prevalence is unknown but more common than APS1 and APS2 due to the high rate of autoimmune thyroid disease in the general population. It is more frequent in middle-aged women and those with a family history of autoimmunity.

Citations

  • Husebye ES, Anderson MS, Kämpe O. Autoimmune Polyendocrine Syndromes. N Engl J Med. 2018;378(12):1132-1141. doi:10.1056/NEJMra1713301

  • Neufeld M, Blizzard RM. Multiple autoimmune endocrine syndromes. J Clin Endocrinol Metab. 1980;51(5):1206-1211.

  • Betterle C, Dal Pra C, Mantero F, Zanchetta R. Autoimmune adrenal insufficiency and autoimmune polyendocrine syndromes: autoantibodies, autoantigens, and their applicability in diagnosis and disease prediction. Endocr Rev. 2002;23(3):327-364.

Frequently Asked Questions

No frequently asked questions found.

Related Articles

No related content found.

Related News

No related content found.

Related Patient Experiences

No related content found.

Related Research Studies

No related content found.

Autoimmune Archive
Privacy Overview

This website uses cookies so that we can provide you with the best user experience possible. Cookie information is stored in your browser and performs functions such as recognising you when you return to our website and helping our team to understand which sections of the website you find most interesting and useful.